Primary Censored Distributions Functions (Single Delay)

Functions for computing primary censored distributions for single delays. More...

Collaboration diagram for Primary Censored Distributions Functions (Single Delay):

Functions
real	primarycensored_cdf (data real d, int dist_id, array[] real params, data real pwindow, data real D, int primary_id, array[] real primary_params)
real	primarycensored_lcdf (data real d, int dist_id, array[] real params, data real pwindow, data real D, int primary_id, array[] real primary_params)
real	primarycensored_lpmf (data int d, int dist_id, array[] real params, data real pwindow, data real d_upper, data real D, int primary_id, array[] real primary_params)
real	primarycensored_pmf (data int d, int dist_id, array[] real params, data real pwindow, data real d_upper, data real D, int primary_id, array[] real primary_params)

Description

Functions for computing primary censored distributions for single delays.

Function Documentation

primarycensored_cdf()

real primarycensored_cdf	(	data real	d,
		int	dist_id,
		array[]real	params,
		data real	pwindow,
		data real	D,
		int	primary_id,
		array[]real	primary_params )

Primary event censored distribution functions Compute the primary event censored CDF for a single delay

Parameters

d	Delay
dist_id	Distribution identifier
params	Array of distribution parameters
pwindow	Primary event window
D	Maximum delay (truncation point)
primary_id	Primary distribution identifier
primary_params	Primary distribution parameters

Returns

Primary event censored CDF, normalized by D if finite (truncation adjustment)

Definition at line 19 of file primarycensored.stan.

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primarycensored_lcdf()

real primarycensored_lcdf	(	data real	d,
		int	dist_id,
		array[]real	params,
		data real	pwindow,
		data real	D,
		int	primary_id,
		array[]real	primary_params )

Compute the primary event censored log CDF for a single delay

Parameters

d	Delay
dist_id	Distribution identifier
params	Array of distribution parameters
pwindow	Primary event window
D	Maximum delay (truncation point)
primary_id	Primary distribution identifier
primary_params	Primary distribution parameters

Returns

Primary event censored log CDF, normalized by D if finite (truncation adjustment)

// Example: Weibull delay distribution with uniform primary distribution
real d = 3.0;
int dist_id = 5; // Weibull
array[2] real params = {2.0, 1.5}; // shape and scale
real pwindow = 1.0;
real D = positive_infinity();
int primary_id = 1; // Uniform
array[0] real primary_params = rep_array(0.0, 0);
real log_cdf = primarycensored_lcdf(
  d, dist_id, params, pwindow, D, primary_id, primary_params
);

Definition at line 88 of file primarycensored.stan.

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primarycensored_lpmf()

real primarycensored_lpmf	(	data int	d,
		int	dist_id,
		array[]real	params,
		data real	pwindow,
		data real	d_upper,
		data real	D,
		int	primary_id,
		array[]real	primary_params )

Compute the primary event censored log PMF for a single delay

Parameters

d	Delay (integer)
dist_id	Distribution identifier
params	Array of distribution parameters
pwindow	Primary event window
d_upper	Upper bound for the delay interval
D	Maximum delay (truncation point)
primary_id	Primary distribution identifier
primary_params	Primary distribution parameters

Returns

Primary event censored log PMF, normalized by D if finite (truncation adjustment)

// Example: Weibull delay distribution with uniform primary distribution
int d = 3;
int dist_id = 5; // Weibull
array[2] real params = {2.0, 1.5}; // shape and scale
real pwindow = 1.0;
real d_upper = 4.0;
real D = positive_infinity();
int primary_id = 1; // Uniform
array[0] real primary_params = {};
real log_pmf = primarycensored_lpmf(
  d, dist_id, params, pwindow, d_upper, D, primary_id, primary_params
);

Definition at line 155 of file primarycensored.stan.

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primarycensored_pmf()

real primarycensored_pmf	(	data int	d,
		int	dist_id,
		array[]real	params,
		data real	pwindow,
		data real	d_upper,
		data real	D,
		int	primary_id,
		array[]real	primary_params )

Compute the primary event censored PMF for a single delay

Parameters

d	Delay (integer)
dist_id	Distribution identifier
params	Array of distribution parameters
pwindow	Primary event window
d_upper	Upper bound for the delay interval
D	Maximum delay (truncation point)
primary_id	Primary distribution identifier
primary_params	Primary distribution parameters

Returns

Primary event censored PMF, normalized by D if finite (truncation adjustment)

// Example: Weibull delay distribution with uniform primary distribution
int d = 3;
real d = 3.0;
int dist_id = 5; // Weibull
array[2] real params = {2.0, 1.5}; // shape and scale
real pwindow = 1.0;
real swindow = 0.1;
real D = positive_infinity();
int primary_id = 1; // Uniform
array[0] real primary_params = {};
real pmf = primarycensored_pmf(d, dist_id, params, pwindow, swindow, D, primary_id, primary_params);

Definition at line 218 of file primarycensored.stan.

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