Create a CmdStanModel with primarycensored Stan functions
Source:R/pcd_cmdstan_model.R
pcd_cmdstan_model.Rd
This function creates a CmdStanModel object using the Stan model and functions from primarycensored and optionally includes additional user-specified Stan files.
Usage
pcd_cmdstan_model(include_paths = primarycensored::pcd_stan_path(), ...)
Arguments
- include_paths
Character vector of paths to include for Stan compilation. Defaults to the result of
pcd_stan_path()
.- ...
Additional arguments passed to cmdstanr::cmdstan_model().
Details
The underlying Stan model (pcens_model.stan
) supports various features:
Multiple probability distributions for modeling delays
Primary and secondary censoring
Truncation
Optional use of reduce_sum for improved performance (via within chain parallelism).
Flexible prior specifications
Optional computation of log-likelihood for model comparison
See also
Modelling wrappers for external fitting packages
fitdistdoublecens()
,
pcd_as_stan_data()